This mode trains and writes a model for each task and gene list.

It is implemented by org.bdval.WriteModel.java.

Mode Parameters

The following options are available in this mode

Flag Arguments Required Description
--model-prefixmodel-prefixnoPrefix used to construct the model filename.
--use-parametersuse-parametersnoName of a Java properties file with model parameter values. These parameter values are appended, before training, to the classifier parameters provided on the command line.
--consensus-of-models consensus-of-modelsnoList of models to construct a consensus model. Such models pool decisions of a set of component models and predict the consensus decision. The argument must point to a file with one model prefix per line.